ORIEN Data Science Symposium

The ORIEN Data Science Symposium, which marks the first day of a three-day ORIEN Scientific Summit, aims to bring together data science, translational, and clinical investigators from ORIEN institutes and industry to discuss innovative ideas, present cutting-edge research, and foster collaborations.

ORIEN DATA SCIENCE
SYMPOSIUM


Grand Hyatt Tampa Bay
Tampa, FL

October 28, 2024  |  7:30 a.m.–5:30 p.m.

REGISTRATION

Complete the online registration form to join in-person. Registration deadline:
Oct. 18, 2024.
Register

Abstract Submission

To participate in the poster presentation, please submit your abstract through the online submission form. Deadlines: Oral Presentation/Travel Awards - Aug. 1, 2024; Poster Only - Oct. 15, 2024.
Submit Abstract
7:30 – 9 a.m. Registration and Light Breakfast
8:30 – 8:40 a.m. Introduction and Welcome
8:40 – 10:20 a.m.

Scientific Session I
Moderator: D. Eric Durbin

Dr. Aik Choon Tan, “Pattern Discovery and Matching for Cancer Treatment Sequences”
Dr. Melissa B. Davis, “The Grand Challenge for Cancer Disparities”
Dr. Leng Han, “Harnessing Big Data for Precision Medicine”
Dr. Hong Zhu, “Addressing Challenges in Analyzing Complex Observational Healthcare Data in Cancer Research”
Dr. Yasminka (Sasha) Jakubek “Chromosomal Alterations in Blood”

10:20 – 10:30 a.m. Break
10:30 – 11:30 a.m.

Keynote Presentation
Moderator: Dr. Michael Cavnar

Dr. Jill Kolesar, "Rural Reach: Advancing Precision Medicine in Cancer Care”

11:30 a.m. – 1 p.m. Lunch Break
1 – 2:40 p.m. Scientific Session II
Moderator: Dr. Daniel Spakowicz

Dr. Jamie Teer, “Population approach to distinguish true somatic mutations from artifact”
Dr. Jinpeng Liu, “Spatially resolved transcriptomics analysis of pediatrics brain cancer”
Dr. Mariano Russo, “Genomic Adaptations for Metastatic Progression in Breast Cancer”
Dr. Ann Chen, “Cancer treatment prediction using Omics data from single cell and bulk samples”
Dr. Jing Su, PhD, “Graph Data Models: Building AI-Ready Research Data Commons for Clinicogenomics”
 
2:40 – 3 p.m. Break
3 – 4 p.m. Scientific Session III
Moderator: Dr. Therese Bocklage
 

Drs. Phaedra Agius and Michael Radmacher, "An Introduction to Two Discovery Tools Enabling Interactive Data Visualization - Real World Survival and Patient Timeline" 
Dr. Emily Vucic, “Use Case: Describing an Alternative to HRD to Detect Sensitivity to PARP Inhibition” 
Dr. Ryan Leung, “Advancing Precision Medicine with AI-Powered Pathology “

4 – 4:20 p.m. Presentation of Poster Award Winners

Moderator: Dr. Chi Wang

Thomas Chia, “IMPACT: Intelligently Matching PAtients to Clinical Trials”
Md Tamzid Islam, “Integrating genomic, clinical, and demographic features to create digital twins for profiling head and neck cancer patients”

4:20 – 4:30 p.m.

Closing Remarks

Dr. Chi Wang

4:30 – 5:30 p.m. Poster Session
6 – 9 p.m. Reception

 

jill kolesar

Jill M. Kolesar

University of Iowa

Dr. Kolesar serves as Dean and Professor and the Jean M. Schmidt Chair in Drug Discovery at the University of Iowa College of Pharmacy. She received her Doctor of Pharmacy degree at the University of Texas Health Science Center in San Antonio, where she also completed a residency and fellowship in oncology. Her research focuses on precision medicine and oncology drug development. She has authored more than 400 abstracts, research articles, and book chapters, and as a principal investigator has received more than $15 million in research funding from the National Cancer Institute, the American Cancer Society, and other sources. In addition, she has 9 patents or patents pending and has founded two start-up companies, Helix Diagnostics and VesiCure Technologies, based on technologies developed in her laboratory.

jinpeng liu

Jinpeng Liu

Markey Cancer Center

 Dr. Jinpeng Liu is an assistant professor in the Division of Cancer Biostatistics in the Department of Internal Medicine at the University of Kentucky. Dr. Liu obtained his Ph.D from University of Kentucky.  His research focuses on computational method design and big data analytics for the interrogation of high-throughput sequencing data in cancer research. He has published several software packages for single cell RNA-seq quantification, large-scale alignment-free sequencing query and genome wide driver mutation discovery. He also led the bioinformatics components in genomics characterization of Lung Cancer Genomics in Appalachian Kentucky, Kentucky Colon Cancer Genome study and Kentucky Pediatric Brain Tumors study.

Sasha Jakubek

Yasminka (Sasha) Jakubek

Markey Cancer Center

Dr. Jakubek is an assistant professor in the Division of Biomedical Informatics at the University of Kentucky and a member of the Markey Cancer Center. She has led and contributed to several genomic studies of tumors, pre-malignant lesions, and genetic mosaicism in normal tissues. Her work includes methods developments for the study of intra-tumor heterogeneity and copy number changes. Dr. Jakubek’s research program aims to advance our understanding of the earliest stages in disease development by studying somatic mutations and clonal dynamics across tissue types. Dr. Jakubek obtained her B.A. from Cornell University and her PhD from Emory University. She completed her postdoctoral training at MD Anderson Cancer Center .

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Aik Choon Tan

Huntsman Cancer Institute

Aik Choon Tan received his B.Eng. degree in Chemical/Bio-process Engineering from the University of Technology Malaysia, and his PhD degree in Computer Science/Bioinformatics from University of Glasgow, UK, in 2000 and 2005, respectively. Dr. Tan conducted his post-doctoral research training at the Johns Hopkins University School of Medicine from 2004 to 2009. In 2022, Dr. Tan was appointed as the inaugural Senior Director of Data Science at the Huntsman Cancer Institute, University of Utah. He holds the Jon M. and Karen Huntsman Endowed Chair in Cancer Data Science, Professor of Oncological Sciences and Biomedical Informatics. His research interests are translational bioinformatics and cancer systems biology, primarily by developing computational and machine learning methods for the analysis and integration of high-throughput cancer "omics" data in understanding and overcoming treatment resistance mechanisms in cancer. 

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Ann Chen

Huntsman Cancer Institute

Dr. Ann Chen obtained her Ph. D. in Biostatistics and Bioinformatics from the Medical University of South Carolina in December of 2005 and received post-doctoral training in the Bioinformatics Training Program in the Department of Statistics at Texas A&M University. She joined Moffitt Cancer Center as an Assistant Member in 2008. She went through the promotion and tenure process and became a Senior Member in 2021. She is a Professor of Epidemiology and Biostatistics in the Department of Internal Medicine and the Department of Population Health Sciences at University of Utah since late 2023. She also serves as the Director of Cancer Biostatistics Shared Resources at Huntsman Cancer Institute (HCI). 

mariano russo

Mariano Russo

Chan Soon-Shiong Institute of Molecular Medicine at Windber

Mariano Russo, PhD, is a bioinformatics scientist at Chan Soon-Shiong Institute of Molecular Medicine at Windber and Murtha Cancer Center Research Program. He received his PhD from the Pennsylvania State University studying personalized medicine approaches for early detection biomarkers in cancer. Before joining the Windber Research Institute, he was a bioinformatician at a clinical genomics company, SOPHiA Genetics, where he worked on developing new bioinformatics pipelines for targeted panels in clinical diagnostics and analyzing NGS sequencing approaches to optimize signal-to-noise solutions. His research is currently focused on understanding the evolutionary genomics of metastatic progression.

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Melissa B. Davis

Morehouse School of Medicine

Dr. Davis is the newly appointed Director of the Institute of Translational Genomic Medicine at Morehouse School of Medicine, and Distinguished Investigator with the Georgia Research Alliance. She also serves as Scientific Director of the International Center for the Study of Breast Cancer Subtypes (ICSBCS), (Interim) Director of Health Equity for the Englander Institute of Precision Medicine and Associate Professor of Cell and Developmental Biology in the Department of Surgery and at Weill Cornell Medicine in New York, NY. She is also a Cancer Ethnicity Scholar, co leading the PolyEthnic-1000 project at New York Genome Center.

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Leng Han

Indiana University

Dr. Han is David Brown Chair Professor in Genomic Medicine, Department of Biostatistics and Health Data Science, Brown Center for Immunotherapy, Indiana University School of Medicine (IUSM). Before joining IU, he was an Associate Professor and CPRIT scholar at Texas A&M University, Institute of Biosciences & Technology, and Assistant Professor at The University of Texas Health Science Center at Houston. Dr. Han obtained his PhD from Chinese Academy of Sciences and did postdoc training at Stanford University and at MD Anderson Cancer Center. Dr. Han’s lab focused on harnessing big data for precision oncology.

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Jamie Teer

Moffitt Cancer Center

Dr. Teer's research interests are focused on developing methods to analyze, interpret and visualize massively-parallel sequencing information in cancer genetics. This includes developing and applying computational methods and graphical tools to better detect genetic variations from sequencing data, understand the functional context of sequence changes, and visualize the results of large-scale genomics studies. Dr. Teer applies these approaches in collaborative projects related to cancer disparities, immuno-oncology, and cancer genomics.

Hong Zhu

Hong Zhu

University of Virginia Comprehensive Cancer Center

Hong Zhu, Ph.D., is a tenured Professor of Biostatistics in the Department of Public Health Sciences at the University of Virginia (UVA) School of Medicine. She currently serves as Director of Biostatistics Shared Resource of UVA Comprehensive Cancer Center. Dr. Zhu has over a decade of experience in conducting statistical methodology research and providing statistical leadership on federally- and foundation-funded projects. Her methodological research focuses on design and analysis of clinical trials, statistical methods for complex survival data, and causal inference. She has extensive experiences in design, conduct, and analysis of patient-centered outcomes research (PCOR), particularly, real-world pragmatic trials and comparative effectiveness research (CER) using complex observational healthcare data (registries, claims, and electronic health record) in areas including cancer, chronic and infectious diseases.

phaedra-agius

Phaedra Agius

Aster Insights

Biography coming soon.

Jing Su

Jing Su

Indiana University
Simon Comprehensive Cancer Center

Dr. Jing Su is an Associate Professor of Biostatistics and Health Data Sciences at the Indiana University School of Medicine. He also serves as the Director of Data Management Services in the Department of Biostatistics and Health Data Science, and the Associate Director of Real-world Data at the Biostatistics and Data Management Core, IU Simon Comprehensive Cancer Center.
 
Dr. Su earned his Ph.D. in Biomedical Engineering from the Georgia Institute of Technology and Emory University. His research focuses on biomedical informatics, graph AI, data management, and research data commons. He is currently working on longitudinal real-world data and clinicogenomics data to advance precision medicine and clinical decision-making. Dr. Su’s work has been published in high-profile journals like the Journal of Clinical Oncology, Nature Communications, and npj Digital Medicine.

 

grand hyatt tampa bayVENUE INFORMATION

Grand Hyatt Tampa Bay

2900 Bayport Drive
Tampa, FL 33607

813-874-1234

Group Rate: $229/Night, plus 13.5% tax
Please reserve your room by Friday, Oct. 4, 2024.
Book Room

Hotel Website

 

AIRPORT INFORMATION

Tampa International Airport (TPA)

4100 George J. Bean Pkwy
Tampa, FL 33607

3 miles from Grand Hyatt Tampa Bay

Website


St. Pete—Clearwater International Airport (PIE)

14700 Terminal Boulevard Suite 221
Clearwater, Florida 33762

14 miles from Grand Hyatt Tampa Bay

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NCI Comprehensive Cancer Center - A Cancer Center Designated by the National Cancer Institute

Markey Cancer Center is designated by the National Cancer Institute as a Comprehensive Cancer Center – a distinction that recognizes our commitment to accelerating precision cancer research and care to patients. We are the first and only NCI-Comprehensive Cancer Center in Kentucky, and one of 57 in the nation.

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